[INFO] cloning repository https://github.com/tmokveld/theseus-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/tmokveld/theseus-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftmokveld%2Ftheseus-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftmokveld%2Ftheseus-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 0c4257dc32dc80e11defe9f80e2b7441f74b0fc8
[INFO] fixing tmokveld/theseus-rs against try#622891a4e29178280638a6b63a8908bde2c0c854+cargoflags=-Zfix-edition=start=2015 for pr-157817-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftmokveld%2Ftheseus-rs" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/tmokveld/theseus-rs
[INFO] finished tweaking git repo https://github.com/tmokveld/theseus-rs
[INFO] tweaked toml for git repo https://github.com/tmokveld/theseus-rs written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/tmokveld/theseus-rs on toolchain 622891a4e29178280638a6b63a8908bde2c0c854
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+622891a4e29178280638a6b63a8908bde2c0c854" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/tmokveld/theseus-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+622891a4e29178280638a6b63a8908bde2c0c854" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3a6becf2bc8dde7f3fa57ede90e4f284e72d296796fc446bbb1e2c7cc0530151" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260
[INFO] running `Command { std: "docker" "start" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260" "/opt/rustwide/cargo-home/bin/cargo" "+622891a4e29178280638a6b63a8908bde2c0c854" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=" "-e" "RUSTDOCFLAGS=" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260" "/opt/rustwide/cargo-home/bin/cargo" "+622891a4e29178280638a6b63a8908bde2c0c854" "fix" "--allow-no-vcs" "--allow-dirty" "--frozen" "--all" "--all-targets" "--message-format=json" "-Zfix-edition=start=2015", kill_on_drop: false }`
[INFO] [stderr]    Compiling cmake v0.1.57
[INFO] [stderr]    Compiling syn v2.0.116
[INFO] [stderr]    Compiling theseus-lib-sys v0.1.0 (/opt/rustwide/workdir/theseus-sys)
[INFO] [stderr] error: failed to run custom build command for `theseus-lib-sys v0.1.0 (/opt/rustwide/workdir/theseus-sys)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/theseus-lib-sys-7b26c1ec1237476d/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:rerun-if-changed=build.rs
[INFO] [stderr]   cargo:rerun-if-env-changed=THESEUS_CMAKE_BUILD_TYPE
[INFO] [stderr]   cargo:rerun-if-env-changed=LIBCLANG_PATH
[INFO] [stderr]   cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/shim/theseus_rs_shim.h
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/shim/theseus_rs_shim.cpp
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/CMakeLists.txt
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/include/theseus/theseus_msa_aligner.h
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/include/theseus/theseus_aligner.h
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/theseus/theseus_msa_aligner.cpp
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/theseus/theseus_aligner.cpp
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/theseus/vector.h
[INFO] [stderr]   cargo:rerun-if-changed=/opt/rustwide/workdir/theseus-sys/theseus-lib/theseus/gfa_graph.cpp
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (100) panicked at theseus-sys/build.rs:150:5:
[INFO] [stderr]   Missing vendored theseus-lib files: ["/opt/rustwide/workdir/theseus-sys/theseus-lib/CMakeLists.txt", "/opt/rustwide/workdir/theseus-sys/theseus-lib/include/theseus/theseus_msa_aligner.h", "/opt/rustwide/workdir/theseus-sys/theseus-lib/theseus/theseus_msa_aligner.cpp"]. Run: git submodule update --init --recursive
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x596108709198 - std[5c0eaf5403f5fa91]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x596108709198 - std[5c0eaf5403f5fa91]::backtrace_rs::backtrace::trace_unsynchronized::<std[5c0eaf5403f5fa91]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x596108709198 - std[5c0eaf5403f5fa91]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x596108709198 - <<std[5c0eaf5403f5fa91]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[6b4415987d471b61]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x59610871dfba - <core[6b4415987d471b61]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x59610871dfba - core[6b4415987d471b61]::fmt::write
[INFO] [stderr]      6:     0x59610870f122 - std[5c0eaf5403f5fa91]::io::default_write_fmt::<std[5c0eaf5403f5fa91]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/io/mod.rs:623:11
[INFO] [stderr]      7:     0x59610870f122 - <std[5c0eaf5403f5fa91]::sys::stdio::unix::Stderr as std[5c0eaf5403f5fa91]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/io/mod.rs:1661:13
[INFO] [stderr]      8:     0x5961086e8e56 - <std[5c0eaf5403f5fa91]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x5961086e8e56 - std[5c0eaf5403f5fa91]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x596108702971 - std[5c0eaf5403f5fa91]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x596108702b2b - std[5c0eaf5403f5fa91]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:814:13
[INFO] [stderr]     12:     0x5961086e8f12 - std[5c0eaf5403f5fa91]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:687:13
[INFO] [stderr]     13:     0x5961086dde39 - std[5c0eaf5403f5fa91]::sys::backtrace::__rust_end_short_backtrace::<std[5c0eaf5403f5fa91]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x5961086e994d - __rustc[33ffaff69ac0afe3]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:678:5
[INFO] [stderr]     15:     0x59610871e78c - core[6b4415987d471b61]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x596108648d09 - build_script_build[e5446968c1a51f9]::assert_submodule_present
[INFO] [stderr]     17:     0x59610864a1b2 - build_script_build[e5446968c1a51f9]::main
[INFO] [stderr]     18:     0x59610864c6d3 - <fn() as core[6b4415987d471b61]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     19:     0x5961086475a6 - std[5c0eaf5403f5fa91]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     20:     0x596108647709 - std[5c0eaf5403f5fa91]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     21:     0x596108701c07 - <&dyn core[6b4415987d471b61]::ops::function::Fn<(), Output = i32> + core[6b4415987d471b61]::panic::unwind_safe::RefUnwindSafe + core[6b4415987d471b61]::marker::Sync as core[6b4415987d471b61]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     22:     0x596108701c07 - std[5c0eaf5403f5fa91]::panicking::catch_unwind::do_call::<&dyn core[6b4415987d471b61]::ops::function::Fn<(), Output = i32> + core[6b4415987d471b61]::panic::unwind_safe::RefUnwindSafe + core[6b4415987d471b61]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:575:43
[INFO] [stderr]     23:     0x596108701c07 - std[5c0eaf5403f5fa91]::panicking::catch_unwind::<i32, &dyn core[6b4415987d471b61]::ops::function::Fn<(), Output = i32> + core[6b4415987d471b61]::panic::unwind_safe::RefUnwindSafe + core[6b4415987d471b61]::marker::Sync>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:543:19
[INFO] [stderr]     24:     0x596108701c07 - std[5c0eaf5403f5fa91]::panic::catch_unwind::<&dyn core[6b4415987d471b61]::ops::function::Fn<(), Output = i32> + core[6b4415987d471b61]::panic::unwind_safe::RefUnwindSafe + core[6b4415987d471b61]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panic.rs:359:14
[INFO] [stderr]     25:     0x596108701c07 - std[5c0eaf5403f5fa91]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/rt.rs:175:24
[INFO] [stderr]     26:     0x596108701c07 - std[5c0eaf5403f5fa91]::panicking::catch_unwind::do_call::<std[5c0eaf5403f5fa91]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:575:43
[INFO] [stderr]     27:     0x596108701c07 - std[5c0eaf5403f5fa91]::panicking::catch_unwind::<isize, std[5c0eaf5403f5fa91]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panicking.rs:543:19
[INFO] [stderr]     28:     0x596108701c07 - std[5c0eaf5403f5fa91]::panic::catch_unwind::<std[5c0eaf5403f5fa91]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/panic.rs:359:14
[INFO] [stderr]     29:     0x596108701c07 - std[5c0eaf5403f5fa91]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/622891a4e29178280638a6b63a8908bde2c0c854/library/std/src/rt.rs:171:5
[INFO] [stderr]     30:     0x596108647051 - std[5c0eaf5403f5fa91]::rt::lang_start::<()>
[INFO] [stderr]     31:     0x59610864c795 - main
[INFO] [stderr]     32:     0x75355d27f1ca - <unknown>
[INFO] [stderr]     33:     0x75355d27f28b - __libc_start_main
[INFO] [stderr]     34:     0x596108645835 - _start
[INFO] [stderr]     35:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260", kill_on_drop: false }`
[INFO] [stdout] d414463502423a46fd8e25feede69236673376693f18787c4664897e2a91f260
